New Service: Genome-wide histone PTM profiling by CUT&RUN- Sequencing
We now provide end-to-end CUT&RUN (Cleavage Under Target and Release Using Nuclease) service, from cells through data.
To find out more about this service, contact us at garpcore@bcm.edu.
New Service: Spatial transcriptomics at single-cell resolution.
Whole-transcriptome spatial mapping of fresh frozen tissue at 10um resolution based on the Slide-seq technology.
To find out more about this service, contact us by email at garpcore@bcm.edu.
New Oxford Nanopore PromethION Sequencer Installed
To find out more about this service, contact us by email at garpcore@bcm.edu.
About the Core
The Genomic and RNA Profiling Core (GARP) provides access to state-of-the-art genomic profiling technology and services, including:
- Sequencing only- Standalone sequencing of user-prepped samples as opposed to samples that go through library prep and sequencing in-house.
- Library prep
- Next Gen Sequencing on our Illumina platforms (iSeq 100, NextSeq 500 and NovaSeq 6000)
- NanoString nCounter Technology
- Sample Quality Control
- Nucleic acid shearing on the Covaris
- DNA size selection on the Pippin HT
- Consultation
- Primary Data Processing & Analysis
Core Resource
We serve as the core resource for the following:
Information for Acknowledgement of Cores in Publications
Core name: Genomic & RNA Profiling Core
Personnel: Daniel C. Kraushaar, Ph.D., Director, Emily Ricco, Lab Manager, Stacy Nguyen, Victoria Rodriguez, Research Staff.
Grants supporting the core: P30 Digestive Disease Center Support Grant (NIDDK-DK56338) and P30 Cancer Center Support Grant (NCI-CA125123), P30 Center for Precision Environmental Health (NIEHS-5P30ES030285-03), NIH S10 grant (1S10OD02346901).
The associated centers should adhere to these additional acknowledgement instructions.
